Difference between revisions of "Premix CH 4/Air flame with scheme GRI12"

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This test case concerns the reduction of the detailed scheme GRI12 for a premixed <math>CH_{4}</math>/air flame at atmospheric pressure and initial temperature of the oxidizer and the methane at 300 K, for an equivalence ratio of 0.75. The target species are : <math>O_{2}</math>, <math>CO</math> and <math>CO_{2}</math>.
+
== '''Objectives''' ==
  
 +
The Stochastic_GRI12 test case describes a reduction of the GRI1.2 scheme for a 1D premixed flame. Starting with 32 species and 177 reactions, we reduce to 14 species and 26 reactions.
  
=== DRGEP species step ===
+
== '''Key parameters''' ==
  
While running the DRGEP species step, your terminal should display the following information :
 
  
<code>
+
The target species considered for this test case are O2, CO and CO2. The characteristics of the premixed flame are displayed below (part of the input_file.ini) :
  scheme : GRI12
+
 
number of species : 32  
+
//------Flame parameters------//
number of reaction : 177  
+
//Flame 0
  reference flame : flames/flame__Phi_0_75__P_100000__T_300.cantera
+
  Tf = 300
  Pressure : 1 bar
+
  To = 300
equivalence ration : 0.75  
+
  Pressure = 1E+05
Composition : <O2:0.202024>
+
  Equivalence_ratio = 0.75
                        <CH4:0.0379821>  
+
  Xf = CH4:1.0             
                        <N2:0.759994>  
+
  Xo = O2:0.21, N2:0.79
</code>
+
// the composition can also be added with mass fractions, for that replace "Xf" by "Yf" and "Xo" by "Yo" 
 +
  Initial_flame = flames/flame__Phi_0_75__P_100000__T_300.cantera
 +
  Final_flame = flames/flame
 +
//End
 +
 
 +
== '''Results''' ==
 +
 
 +
=== DRGEP step ===
 +
 
 +
While running the DRGEP species step (with <code>step = DRGEP_Species</code> in the "input_file.ini"), your terminal should display the following information :
 +
 
 +
  MECHANISM:------------------------------------------------------------------------------------------------------
 +
            Reading initial mechanism "mechanisms/gri12.xml" with description "gri12" ----------> OK
 +
              Number of species: 32
 +
              Number of reactions: 177
 +
 
 +
  PREMIXED FLAME:--------------------------------------------------------------
 +
  Reading initial flame "flames/flame__Phi_0_75__P_100000__T_300.cantera" with description "st_flame" ----------> description: test flame
 +
  OK
 +
              Pressure: 100000
 +
              Equivalence ratio: 0.75
 +
              Composition (mass fractions):  
 +
                                    <O2:0.223145>
 +
                                    <CH4:0.0419532>
 +
                                    <N2:0.734901>
 +
 
  
  
 
followed by the the species associated with their rank :
 
followed by the the species associated with their rank :
  
<code>
+
-------DRGEP coefficients-------
  4.17578965277519e-189 AR  
+
  --------------------------------
  1.81320667696424e-06  HCCOH  
+
1.37642e-15 AR
  3.33272520534669e-05  C2H  
+
  2.12795e-06  HCCOH
  0.000136594690602079 CH2CO  
+
  4.32935e-05  C2H
  0.000228724937160335 C  
+
  0.000157543 CH2CO
  0.00039194258246205 C2H2  
+
  0.000362521 C
  0.000909271897890726 HCCO  
+
  0.000444401 C2H2
  0.00324304055657054 CH
+
  0.00101888 HCCO
  0.00391278892730799 C2H3
+
  0.00357515 C2H3
  0.00395833642581853 CH3OH
+
  0.00398744 CH3OH
  0.00517918655958378 CH2OH  
+
  0.00409277 CH
  0.0158390004661296 C2H4  
+
  0.00543294 CH2OH
  0.0158390004661296 C2H5  
+
  0.0126485 C2H4
  0.0160151369051444 CH2(S)
+
  0.0126485 C2H5
  0.0209164664682532 C2H6
+
  0.0170844 CH2(S)
  0.0317122146887158 CH2  
+
  0.0190984 C2H6
  0.0395596174129288 H2O2
+
  0.0314311 CH2
  0.0796917798682698 H2  
+
  0.0362943 H2O2
  0.0949180222420726 CH3  
+
  0.0844714 H2
  0.108929211050051 HCO
+
  0.0862782 CH3
  0.123697044495215 CH2O
+
  0.105794 CH2O
  0.154156160901222 H2O  
+
  0.110349 HCO
  0.165970760424094 CH3O  
+
  0.141159 H2O
  0.222439341655666 O  
+
  0.150828 CH3O
  0.292243743837601 HO2  
+
  0.218864 O
  0.501413374426018 OH  
+
  0.294638 HO2
  0.501449580770414 H  
+
  0.48461 OH
  1  O2  
+
  0.48475 H
 +
  1  O2
 
  1  CH4
 
  1  CH4
  1  CO  
+
  1  CO
  1  CO2  
+
  1  CO2
 
  1  N2
 
  1  N2
</code>
 
  
  
From a detailed 32 species scheme, we obtain reduced schemes (31 to 14 species). and we choose the one with 16 species for the next step.
 
  
  
=== DRGEP reaction step ===
+
From a detailed 32 species scheme, we obtain reduced schemes (31 to 14 species). and we choose the one with 14 species for the next step because the shape of the velocity and species are conserved (and Cantera is unable to converge the 13-species scheme. The code will therefore end with an error message. But it is fine). The following Figure 1 is available in the directory <code>outputs/Premixed/</code> with the file format of EPS.
  
From the reduced scheme with 16 species, the DRGEP reaction step displays the associated 64 reactions (forward, reverse and global) with their rank :  
+
[[File:DRGEPSpec_14Sp_42R_Premixed.png|900px|center]]
  
<code>
+
Fig1 : Comparison between the reference trajectories of the target species, the temperature and the flame speed  (in black), and the trajectories computed with the reduced mechanism with 14 transported species and 42 reactions, after a DRGEP species reduction  (in red).
  
Forward  Reaction 21  2.65556648970097e-07
 
Forward  Reaction 38  3.59315882536714e-07
 
Forward  Reaction 23  9.65075698341805e-07
 
Forward  Reaction 1  1.99147535460019e-05
 
Forward  Reaction 2  3.0108881792819e-05
 
Forward  Reaction 13  3.47632410738041e-05
 
Forward  Reaction 20  4.59273162228091e-05
 
Forward  Reaction 22  6.5421981964005e-05
 
Forward  Reaction 14  0.000202459568561881
 
Forward  Reaction 32  0.000431915681036368
 
Forward  Reaction 34  0.00118726444247531
 
Forward  Reaction 24  0.00123454026913856
 
Forward  Reaction 49  0.00171458689401113
 
Forward  Reaction 8  0.00208933537669543
 
Forward  Reaction 5  0.00250073950975345
 
Forward  Reaction 58  0.0029328736849909
 
Forward  Reaction 43  0.00313423440659561
 
Forward  Reaction 28  0.00354315828849563
 
Forward  Reaction 29  0.00432410581918681
 
Forward  Reaction 12  0.0057324416995053
 
Forward  Reaction 9  0.00723850780173652
 
Forward  Reaction 36  0.00726467938447275
 
Forward  Reaction 37  0.00762305984810174
 
Forward  Reaction 60  0.00837071310423301
 
Forward  Reaction 55  0.00967067770549656
 
Forward  Reaction 10  0.00995938114471742
 
Forward  Reaction 57  0.0108452284679802
 
Forward  Reaction 52  0.0116823138863233
 
Forward  Reaction 54  0.0119088964221497
 
Forward  Reaction 59  0.0135395604975599
 
Forward  Reaction 33  0.0181258505484799
 
Forward  Reaction 47  0.0253199169874118
 
Forward  Reaction 44  0.0264882781521135
 
Forward  Reaction 26  0.0266647357653343
 
Forward  Reaction 51  0.0304998981070071
 
Forward  Reaction 15  0.0371215003811295
 
Forward  Reaction 11  0.0399553627623278
 
Forward  Reaction 3  0.041383550622097
 
Forward  Reaction 40  0.0423920603038843
 
Forward  Reaction 7  0.044772464197727
 
Forward  Reaction 25  0.0535989530406037
 
Forward  Reaction 16  0.0610705690098053
 
Forward  Reaction 35  0.0679285389879311
 
Forward  Reaction 31  0.0861435044392661
 
Forward  Reaction 4  0.101457456453875
 
Forward  Reaction 62  0.117321589614816
 
Forward  Reaction 50  0.122522429384353
 
Forward  Reaction 30  0.125925739824055
 
Forward  Reaction 56  0.132842559901436
 
Forward  Reaction 48  0.141585643145976
 
Forward  Reaction 42  0.1433270053236
 
Forward  Reaction 27  0.146996704912892
 
Forward  Reaction 6  0.16809842491251
 
Forward  Reaction 39  0.176387128734029
 
Forward  Reaction 61  0.179573129626405
 
Forward  Reaction 17  0.203621024287784
 
Forward  Reaction 64  0.233186012643771
 
Forward  Reaction 41  0.239820536416947
 
Forward  Reaction 45  0.286746138901124
 
Forward  Reaction 19  0.288675611970156
 
Forward  Reaction 18  0.337396372672854
 
Forward  Reaction 53  0.455185941896789
 
Forward  Reaction 63  0.47505870587493
 
Forward  Reaction 46  0.475815176666637
 
Reverse  Reaction 57  3.26837333436618e-12
 
Reverse  Reaction 21  6.67279884511109e-12
 
Reverse  Reaction 23  5.29972901270141e-11
 
Reverse  Reaction 12  2.84364117848902e-10
 
Reverse  Reaction 36  3.24456989903868e-10
 
Reverse  Reaction 49  4.05658008947093e-10
 
Reverse  Reaction 59  4.9890704681467e-10
 
Reverse  Reaction 1  1.92428659747618e-09
 
Reverse  Reaction 2  1.99392621471512e-09
 
Reverse  Reaction 20  2.16276381931258e-09
 
Reverse  Reaction 6  2.52739670778618e-09
 
Reverse  Reaction 22  3.16920782516018e-09
 
Reverse  Reaction 29  5.53619863377469e-08
 
Reverse  Reaction 24  1.1390686408026e-07
 
Reverse  Reaction 8  1.29677332653173e-07
 
Reverse  Reaction 10  2.02416386643742e-07
 
Reverse  Reaction 9  2.71149137178157e-07
 
Reverse  Reaction 33  3.78473412952319e-07
 
Reverse  Reaction 55  4.3199571388129e-07
 
Reverse  Reaction 50  4.54932959918036e-07
 
Reverse  Reaction 64  1.12253587393686e-06
 
Reverse  Reaction 60  1.2356354288313e-06
 
Reverse  Reaction 47  1.28935417904187e-06
 
Reverse  Reaction 54  2.73797526364995e-06
 
Reverse  Reaction 32  4.18614414933338e-06
 
Reverse  Reaction 52  4.79955686596551e-06
 
Reverse  Reaction 30  8.46320800650365e-06
 
Reverse  Reaction 25  1.50550332054416e-05
 
Reverse  Reaction 53  1.93658450703091e-05
 
Reverse  Reaction 38  2.01388692854111e-05
 
Reverse  Reaction 13  2.55894190167331e-05
 
Reverse  Reaction 51  2.76559797018055e-05
 
Reverse  Reaction 16  4.31154735714836e-05
 
Reverse  Reaction 26  9.69996379244262e-05
 
Reverse  Reaction 14  0.000154180216525888
 
Reverse  Reaction 4  0.000165802544190284
 
Reverse  Reaction 43  0.000175030766020729
 
Reverse  Reaction 5  0.000183840087461255
 
Reverse  Reaction 35  0.000297321330777284
 
Reverse  Reaction 11  0.000326419107864007
 
Reverse  Reaction 63  0.000464693218352857
 
Reverse  Reaction 27  0.000507493503463543
 
Reverse  Reaction 15  0.000543996911899647
 
Reverse  Reaction 28  0.000659861549924196
 
Reverse  Reaction 42  0.00079354399745841
 
Reverse  Reaction 18  0.00088718660386306
 
Reverse  Reaction 7  0.000891022538571035
 
Reverse  Reaction 48  0.00172926649982152
 
Reverse  Reaction 58  0.0020901475838583
 
Reverse  Reaction 44  0.00258349035657405
 
Reverse  Reaction 17  0.0047957340669952
 
Reverse  Reaction 45  0.00724730179449375
 
Reverse  Reaction 31  0.0113005044060406
 
Reverse  Reaction 40  0.0266061298369107
 
Reverse  Reaction 37  0.0278617799543521
 
Reverse  Reaction 56  0.0335013935007282
 
Reverse  Reaction 3  0.0386836179578153
 
Reverse  Reaction 62  0.0449829236142434
 
Reverse  Reaction 61  0.0731704008495751
 
Reverse  Reaction 39  0.17441580021743
 
Reverse  Reaction 41  0.242666175050817
 
Reverse  Reaction 34  0.282156513749663
 
Reverse  Reaction 19  0.284651069320427
 
Reverse  Reaction 46  0.353960749712388
 
Reaction 21  2.65555052795916e-07
 
Reaction 23  9.65066418064913e-07
 
Reaction 38  1.97795534028744e-05
 
Reaction 1  1.99144877950711e-05
 
Reaction 13  2.20296368066119e-05
 
Reaction 2  3.01086022514823e-05
 
Reaction 20  4.5926943770907e-05
 
Reaction 22  6.54214371838278e-05
 
Reaction 14  0.000165706685950761
 
Reaction 32  0.000427729536887034
 
Reaction 24  0.00123452687175447
 
Reaction 49  0.00171458673892465
 
Reaction 58  0.00203483219883547
 
Reaction 8  0.00208933247158809
 
Reaction 5  0.00243954779998703
 
Reaction 43  0.00313303820563117
 
Reaction 28  0.00315033572398461
 
Reaction 29  0.00432410581916994
 
Reaction 12  0.0057324416995053
 
Reaction 9  0.00723850770916207
 
Reaction 36  0.00726467938447275
 
Reaction 60  0.00837038219010652
 
Reaction 55  0.00967047269391794
 
Reaction 10  0.00995938113965295
 
Reaction 57  0.0108452284679802
 
Reaction 3  0.0112397150848352
 
Reaction 52  0.0116823131946808
 
Reaction 54  0.0119088964202926
 
Reaction 59  0.0135395604545309
 
Reaction 33  0.0181258503488236
 
Reaction 40  0.0227744636401871
 
Reaction 47  0.0253199166571105
 
Reaction 44  0.0254598000870415
 
Reaction 37  0.0255259521093582
 
Reaction 26  0.0266583779916076
 
Reaction 51  0.0304954476547812
 
Reaction 15  0.0371215003811294
 
Reaction 11  0.0399553627436466
 
Reaction 7  0.0444807410030957
 
Reaction 25  0.0535989530406037
 
Reaction 41  0.0589427122863707
 
Reaction 16  0.0610705690098053
 
Reaction 35  0.0679283414934569
 
Reaction 31  0.0770607686330011
 
Reaction 4  0.101457456453875
 
Reaction 62  0.117137049211189
 
Reaction 50  0.122522429384353
 
Reaction 56  0.124033601156345
 
Reaction 30  0.125925739820876
 
Reaction 48  0.141585643145976
 
Reaction 42  0.142533461326142
 
Reaction 27  0.14699292988816
 
Reaction 39  0.164887706718602
 
Reaction 6  0.168098424304262
 
Reaction 61  0.179259480480642
 
Reaction 17  0.201385465570516
 
Reaction 19  0.203439999114996
 
Reaction 64  0.233186012643771
 
Reaction 34  0.282007968901971
 
Reaction 45  0.285566918056148
 
Reaction 18  0.337396372672854
 
Reaction 53  0.455185941896524
 
Reaction 63  0.47505870587493
 
Reaction 46  0.475815176666636
 
  
</code>
 
  
After this step, by comparing the reference trajectories with the new ones, we choose to delete 25 reactions, so the next step is performed with 16 species and 39 reactions.
+
From the reduced scheme with 14 species, we then perform the next DRGEP Reactions step by manually change the value of the "step" keyword in the "input_file.ini" as <code>step = DRGEP_Reactions</code>. Make sure the reference mechanism and trajectory are correctly set up (i.e., <code>mech_ref = mechanisms/gri12.xml; trajectory_ref = Ref_DRGEP_Species32</code>). The DRGEP Reactions step displays the associated 42 reactions (forward, reverse and global) with their rank :
  
=== QSS step ===
 
  
The QSS step provides the QSS criteria of each species and the different links with the others species :
+
Reaction 22  9.23227e-06
 +
Reaction 1  2.08238e-05
 +
Reaction 11  2.29985e-05
 +
Reaction 2  5.30076e-05
 +
Reaction 12  0.00029274
 +
Reaction 18  0.00191785
 +
Reaction 6  0.00198407
 +
Reaction 36  0.00293471
 +
Reaction 38  0.00420356
 +
Reaction 31  0.00462285
 +
Reaction 34  0.00611017
 +
Reaction 7  0.00905302
 +
Reaction 10  0.00921383
 +
Reaction 32  0.0106164
 +
Reaction 37  0.0133867
 +
Reaction 8  0.0136681
 +
Reaction 25  0.0237175
 +
Reaction 24  0.0277978
 +
Reaction 29  0.0305413
 +
Reaction 13  0.0329515
 +
Reaction 9  0.0342601
 +
Reaction 3  0.0398655
 +
Reaction 5  0.0422524
 +
Reaction 14  0.0442348
 +
Reaction 19  0.0493222
 +
Reaction 35  0.102885
 +
Reaction 40  0.103946
 +
Reaction 26  0.111933
 +
Reaction 30  0.131232
 +
Reaction 23  0.159996
 +
Reaction 21  0.161005
 +
Reaction 20  0.180048
 +
Reaction 39  0.18465
 +
Reaction 42  0.19675
 +
Reaction 4  0.208145
 +
Reaction 15  0.215404
 +
Reaction 16  0.222982
 +
Reaction 27  0.274358
 +
Reaction 17  0.274617
 +
Reaction 33  0.403162
 +
Reaction 41  0.437888
 +
Reaction 28  0.438952
  
<code>
 
  
Species H2  0.0769830846273742
+
After this step, by comparing the reference trajectories with the new ones, we choose to delete 16 reactions because after 17 reactions removed, the CO2 profile loose its initial shape.
Species H  0.0376368421057076
+
The next step is performed with 14 species and 26 reactions.
Species O  0.0167167775887314
+
Species O2  0.258674891061719
+
Species OH  0.0125468871801414
+
Species H2O  0.178212801707615
+
Species HO2  0.0117252032062939
+
Species H2O2  0.022738289520887
+
Species CH3  0.135965474597304
+
Species CH4  0.792369178550483
+
Species CO  0.7113619941787
+
Species CO2 0.677676406648207
+
Species HCO  0.00241863256278453
+
Species CH2O  0.0628591925432011
+
Species CH3O  0.00992597522895945
+
Species N2  0
+
  
Interactions with species H2  with QSS Criteria 0.0769830846273742
+
[[File:DRGEPR_14sp_26R_Premixed.png|900px|center]]
O:1  OH:1  CH3:1  HCO:1 
+
  
Interactions with species with QSS Criteria 0.0376368421057076
+
Fig2 : Comparison between the trajectories of the target species, the temperature and the flame speed computed with the reference 32-species 177-reaction mechanism (in black) , and the trajectories computed with the reduced mechanism with 14 transported species and 26 reactions after a DRGEP reaction reduction (in red).
OH:1  H2O:3  HO2:3  CH3:1  HCO:1  CH2O:3  CH3O:1  N2:1 
+
  
Interactions with species O  with QSS Criteria 0.0167167775887314
+
=== QSS step ===
H2:1  OH:1  H2O:2  HO2:1  CH3:1  CH2O:1  CH3O:1 
+
  
Interactions with species OH  with QSS Criteria 0.0125468871801414
 
H2:1  H:1  O:1  OH:3  HO2:1  H2O2:1  CH3:2  HCO:2  CH2O:1  CH3O:1 
 
  
Interactions with species H2O  with QSS Criteria 0.178212801707615
+
The '''computeQSSCriteria''' step provides the QSS criteria of each species and the different links with the others species :  
H:3  O:2  HO2:2  CH3:1  HCO:
+
  
  Interactions with species HO2 with QSS Criteria 0.0117252032062939
+
  Species H 0.0752034
  H:3  O:1 OH:1 H2O:2 HO2:2 CH3:2 CH2O:1 N2:1  
+
  Species 0.0211171
 +
Species O2  0.33194
 +
Species OH  0.019287
 +
Species H2O  0.379235
 +
Species HO2  0.0113201
 +
Species CH3  0.107792
 +
Species CH4  0.79541
 +
Species CO  0.693792
 +
Species CO2  0.720209
 +
Species HCO  0.00321461
 +
Species CH2O  0.0817911
 +
Species CH3O  0.0360026
 +
Species N2  0
  
Interactions with species H2O2  with QSS Criteria 0.022738289520887
 
OH:1 
 
  
  Interactions with species CH3 with QSS Criteria 0.135965474597304 
+
  Interactions with species H with QSS Criteria 0.0752034
  H2:1 H:1  O:1  OH:2  H2O:1  HO2:2  HCO:1   
+
  HO2:2 CH3:1  CH2O:2  CH3O:1  N2:1   
  
  Interactions with species HCO with QSS Criteria 0.00241863256278453
+
  Interactions with species O with QSS Criteria 0.0211171
  H2:1  H:1  OH:2 H2O:2 CH3:1   
+
  OH:1  HO2:1  CH3:1 CH2O:1 CH3O:1   
  
  Interactions with species CH2O with QSS Criteria 0.0628591925432011
+
  Interactions with species OH with QSS Criteria 0.019287
H:3 O:1  OH:1 HO2:1   
+
  O:1  OH:2 HO2:1  CH3:2  HCO:2  CH2O:1  CH3O:1   
  
  Interactions with species CH3O  with QSS Criteria 0.00992597522895945
+
Interactions with species HO2  with QSS Criteria 0.0113201
 +
H:2  O:1  OH:1  CH3:1  CH2O:1  N2:1 
 +
 
 +
Interactions with species CH3  with QSS Criteria 0.107792
 +
H:1  O:1  OH:2  HO2:1 
 +
 
 +
Interactions with species HCO  with QSS Criteria 0.00321461
 +
OH:2 
 +
 
 +
Interactions with species CH2O  with QSS Criteria 0.0817911
 +
H:2  O:1  OH:1  HO2:1 
 +
 
 +
  Interactions with species CH3O  with QSS Criteria 0.0360026
 
  H:1  O:1  OH:1   
 
  H:1  O:1  OH:1   
  
Line 322: Line 194:
 
  H:1  HO2:1   
 
  H:1  HO2:1   
  
</code>
 
  
We choose to put the species N2, CH3O and HCO in QSS hypothesis due to their low QSS coefficient. The species HO2 could have been a good candidate too but it is linked to himself (non linearity).
 
  
In order to obtain the trajectories of the 16-species 39-reaction reduced scheme with these 3 species in QSS hypothesis, we run the '''getQSSfile''' step and we obtain the following graphs :
+
We choose to put the species CH3O and HCO in QSS hypothesis due to their low QSS coefficient. The species HO2 could have been a good candidate too but it is linked to himself (non linearity).
  
(insert : graph of getQSSfile)
+
In order to obtain the trajectories of the 14-species 26-reaction reduced scheme with these 2 species in QSS hypothesis, we run the '''getQSSfile''' step and we obtain the following graphs.We observe that the final state and the shape of the trajectories are conserved. It is under these conditions that the optimisation step will be efficient.
  
 +
We can note that the main target profiles are not impacted by the QSS hypothesis, nevertheless the fitness seems better. This is due to errors compensations by the other species not shown here (remind that the fitness is calculated for all species, velocity and temperature, the target just have a larger impact coefficient on the fitness).
 +
 +
[[File:QSS_12sp_Premixed.png|900px|center]]
 +
 +
Fig3 : Comparison between the reference trajectories of the target species, the temperature and the flame speed (in black), and the trajectories computed with the reduced mechanism with 12 transported species and 26 reactions after a DRGEp reaction reduction (in red).
  
 
=== Optimisation ===
 
=== Optimisation ===
 +
 +
The final step of the ORCh method, the genetic algorithm, enables to recover the trajectories of the target species. Firstly, we allowed a 10 % variation on the pre exponential factor, the temperature exposant and 6 % on the energy activation in order to find their optimal values (i.e., <code>AllowedVariation_A = 0.10; AllowedVariation_b = 0.10; AllowedVariation_E = 0.06</code>).
 +
 +
A population of 40 elements was used during 50 generations. The optimisation step supports running in parallel. For example, we can use 20 processors via <code>mpirun -np 20 mainprogram</code>. Just make sure that PopSize divided by the number of processes is an integer. This step may take a long time, like several hours, depending on how many processors are used. The optimised scheme is in <code>analytic_schemes/Ref/</code> while the corresponding EPS figures can be found in <code>analytic_schemes/PLOTS/</code>.
 +
 +
 +
The following trajectories of the temperature, the flame speed and the target species match perfectly the ones of the reference detailed scheme with only 12 transported species and 26 reactions.
 +
 +
[[File:Optim_PremixGRI12.png|900px|center]]
 +
 +
Fig4 : Comparison between the reference trajectories of the target species, the temperature and the flame speed (in black), and the trajectories computed with the reduced mechanism with 12 transported species and 26 reactions after optimisation (in red).
 +
 +
== '''Bibliography''' ==

Latest revision as of 17:17, 6 February 2019

Objectives

The Stochastic_GRI12 test case describes a reduction of the GRI1.2 scheme for a 1D premixed flame. Starting with 32 species and 177 reactions, we reduce to 14 species and 26 reactions.

Key parameters

The target species considered for this test case are O2, CO and CO2. The characteristics of the premixed flame are displayed below (part of the input_file.ini) :

//------Flame parameters------//
//Flame 0
 Tf = 300
 To = 300 
 Pressure = 1E+05
 Equivalence_ratio = 0.75 
 Xf = CH4:1.0               
 Xo = O2:0.21, N2:0.79
// the composition can also be added with mass fractions, for that replace "Xf" by "Yf" and "Xo" by "Yo"  
 Initial_flame = flames/flame__Phi_0_75__P_100000__T_300.cantera
 Final_flame = flames/flame
//End

Results

DRGEP step

While running the DRGEP species step (with step = DRGEP_Species in the "input_file.ini"), your terminal should display the following information :

MECHANISM:------------------------------------------------------------------------------------------------------
           Reading initial mechanism "mechanisms/gri12.xml" with description "gri12" ----------> OK
              Number of species: 32
              Number of reactions: 177
PREMIXED FLAME:--------------------------------------------------------------
 Reading initial flame "flames/flame__Phi_0_75__P_100000__T_300.cantera" with description "st_flame" ----------> description: test flame
OK
              Pressure: 100000
              Equivalence ratio: 0.75
              Composition (mass fractions): 
                                   <O2:0.223145>
                                   <CH4:0.0419532>
                                   <N2:0.734901>


followed by the the species associated with their rank :

-------DRGEP coefficients-------
--------------------------------
1.37642e-15  AR
2.12795e-06  HCCOH
4.32935e-05  C2H
0.000157543  CH2CO
0.000362521  C
0.000444401  C2H2
0.00101888  HCCO
0.00357515  C2H3
0.00398744  CH3OH
0.00409277  CH
0.00543294  CH2OH
0.0126485  C2H4
0.0126485  C2H5
0.0170844  CH2(S)
0.0190984  C2H6
0.0314311  CH2
0.0362943  H2O2
0.0844714  H2
0.0862782  CH3
0.105794  CH2O
0.110349  HCO
0.141159  H2O
0.150828  CH3O
0.218864  O
0.294638  HO2
0.48461  OH
0.48475  H
1  O2
1  CH4
1  CO
1  CO2
1  N2



From a detailed 32 species scheme, we obtain reduced schemes (31 to 14 species). and we choose the one with 14 species for the next step because the shape of the velocity and species are conserved (and Cantera is unable to converge the 13-species scheme. The code will therefore end with an error message. But it is fine). The following Figure 1 is available in the directory outputs/Premixed/ with the file format of EPS.

DRGEPSpec 14Sp 42R Premixed.png

Fig1 : Comparison between the reference trajectories of the target species, the temperature and the flame speed (in black), and the trajectories computed with the reduced mechanism with 14 transported species and 42 reactions, after a DRGEP species reduction (in red).


From the reduced scheme with 14 species, we then perform the next DRGEP Reactions step by manually change the value of the "step" keyword in the "input_file.ini" as step = DRGEP_Reactions. Make sure the reference mechanism and trajectory are correctly set up (i.e., mech_ref = mechanisms/gri12.xml; trajectory_ref = Ref_DRGEP_Species32). The DRGEP Reactions step displays the associated 42 reactions (forward, reverse and global) with their rank :


Reaction 22  9.23227e-06
Reaction 1  2.08238e-05
Reaction 11  2.29985e-05
Reaction 2  5.30076e-05
Reaction 12  0.00029274
Reaction 18  0.00191785
Reaction 6  0.00198407
Reaction 36  0.00293471
Reaction 38  0.00420356
Reaction 31  0.00462285
Reaction 34  0.00611017
Reaction 7  0.00905302
Reaction 10  0.00921383
Reaction 32  0.0106164
Reaction 37  0.0133867
Reaction 8  0.0136681
Reaction 25  0.0237175
Reaction 24  0.0277978
Reaction 29  0.0305413
Reaction 13  0.0329515
Reaction 9  0.0342601
Reaction 3  0.0398655
Reaction 5  0.0422524
Reaction 14  0.0442348
Reaction 19  0.0493222
Reaction 35  0.102885
Reaction 40  0.103946
Reaction 26  0.111933
Reaction 30  0.131232
Reaction 23  0.159996
Reaction 21  0.161005
Reaction 20  0.180048
Reaction 39  0.18465
Reaction 42  0.19675
Reaction 4  0.208145
Reaction 15  0.215404
Reaction 16  0.222982
Reaction 27  0.274358
Reaction 17  0.274617
Reaction 33  0.403162
Reaction 41  0.437888
Reaction 28  0.438952


After this step, by comparing the reference trajectories with the new ones, we choose to delete 16 reactions because after 17 reactions removed, the CO2 profile loose its initial shape. The next step is performed with 14 species and 26 reactions.

DRGEPR 14sp 26R Premixed.png

Fig2 : Comparison between the trajectories of the target species, the temperature and the flame speed computed with the reference 32-species 177-reaction mechanism (in black) , and the trajectories computed with the reduced mechanism with 14 transported species and 26 reactions after a DRGEP reaction reduction (in red).

QSS step

The computeQSSCriteria step provides the QSS criteria of each species and the different links with the others species :

Species H  0.0752034
Species O  0.0211171
Species O2  0.33194
Species OH  0.019287
Species H2O  0.379235
Species HO2  0.0113201
Species CH3  0.107792
Species CH4  0.79541
Species CO  0.693792
Species CO2  0.720209
Species HCO  0.00321461
Species CH2O  0.0817911
Species CH3O  0.0360026
Species N2  0


Interactions with species H  with QSS Criteria 0.0752034
HO2:2  CH3:1  CH2O:2  CH3O:1  N2:1  
Interactions with species O  with QSS Criteria 0.0211171
OH:1  HO2:1  CH3:1  CH2O:1  CH3O:1  
Interactions with species OH  with QSS Criteria 0.019287
O:1  OH:2  HO2:1  CH3:2  HCO:2  CH2O:1  CH3O:1  
Interactions with species HO2  with QSS Criteria 0.0113201
H:2  O:1  OH:1  CH3:1  CH2O:1  N2:1  
Interactions with species CH3  with QSS Criteria 0.107792
H:1  O:1  OH:2  HO2:1  
Interactions with species HCO  with QSS Criteria 0.00321461
OH:2  
Interactions with species CH2O  with QSS Criteria 0.0817911
H:2  O:1  OH:1  HO2:1  
Interactions with species CH3O  with QSS Criteria 0.0360026
H:1  O:1  OH:1  
Interactions with species N2  with QSS Criteria 0
H:1  HO2:1  


We choose to put the species CH3O and HCO in QSS hypothesis due to their low QSS coefficient. The species HO2 could have been a good candidate too but it is linked to himself (non linearity).

In order to obtain the trajectories of the 14-species 26-reaction reduced scheme with these 2 species in QSS hypothesis, we run the getQSSfile step and we obtain the following graphs.We observe that the final state and the shape of the trajectories are conserved. It is under these conditions that the optimisation step will be efficient.

We can note that the main target profiles are not impacted by the QSS hypothesis, nevertheless the fitness seems better. This is due to errors compensations by the other species not shown here (remind that the fitness is calculated for all species, velocity and temperature, the target just have a larger impact coefficient on the fitness).

QSS 12sp Premixed.png

Fig3 : Comparison between the reference trajectories of the target species, the temperature and the flame speed (in black), and the trajectories computed with the reduced mechanism with 12 transported species and 26 reactions after a DRGEp reaction reduction (in red).

Optimisation

The final step of the ORCh method, the genetic algorithm, enables to recover the trajectories of the target species. Firstly, we allowed a 10 % variation on the pre exponential factor, the temperature exposant and 6 % on the energy activation in order to find their optimal values (i.e., AllowedVariation_A = 0.10; AllowedVariation_b = 0.10; AllowedVariation_E = 0.06).

A population of 40 elements was used during 50 generations. The optimisation step supports running in parallel. For example, we can use 20 processors via mpirun -np 20 mainprogram. Just make sure that PopSize divided by the number of processes is an integer. This step may take a long time, like several hours, depending on how many processors are used. The optimised scheme is in analytic_schemes/Ref/ while the corresponding EPS figures can be found in analytic_schemes/PLOTS/.


The following trajectories of the temperature, the flame speed and the target species match perfectly the ones of the reference detailed scheme with only 12 transported species and 26 reactions.

Optim PremixGRI12.png

Fig4 : Comparison between the reference trajectories of the target species, the temperature and the flame speed (in black), and the trajectories computed with the reduced mechanism with 12 transported species and 26 reactions after optimisation (in red).

Bibliography